TIDE

Response Prediction Query Gene Regulator Prioritization Biomarker Evaluation Download FAQ Contact News
{{ nickname }} Logout
Check for newest update information (Update on 20200918)

TIDE:   Tumor Immune Dysfunction and Exclusion

The module can prioritize genes in the user input gene set for mechanistic follow-up experiments.

Tutorial video of regulator prioritization

Download the video

README

Input

  • Input a gene set with whole Entrez ID or whole official gene symbol. (separated by ",")
  • Example:
    • Manually Input:

      PTPN2, AXL, EPHA3, CACNA1G, DNMT3A, EPHA2, PDE1B, ROR2, HTRA1, GZMM, KCNK2, KCNF1, SV2A, CLCNKB, SCN9A, SCN2A, HDAC3, PADI4, GRM1, HRH1


    • Gene set file:

Custom Ranking Result

  • Gene
    • Rank(ascendingly/descendingly) genes based on average score of a group with multiple cohorts:
    • Rank(ascendingly/descendingly) genes based on score of a interested corhort:

RUN

{{loadingMessage}}

  

OR

  

Input Genes: {{form.geneset.value}}

Input Error

  • {{msg}}

    • Dana Farber Cancer Institute & Harvard University © 2018-2020

    Contact us
    /
    Infomation